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Cluster: HRGMv2_4147_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_25 30931 31629 - GT2
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_26 31762 32181 + GT2
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_27 32444 33541 - GT4
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_28 33578 34513 + GT2
pfam HRGMv2_4147_7 HRGMv2_4147_7_29 34553 34825 - Transposase_mut
NULL(UNKNOWN) HRGMv2_4147_7 HRGMv2_4147_7_30 35103 35246 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_31 35922 36911 - GT2
TC HRGMv2_4147_7 HRGMv2_4147_7_32 37002 38480 + 2.A.66.2.23
Gene ID: HRGMv2_4147_7_25
Type: CAZyme
Location: 30931 - 31629 (-)
Gene ID: HRGMv2_4147_7_26
Type: CAZyme
Location: 31762 - 32181 (+)
Gene ID: HRGMv2_4147_7_27
Type: CAZyme
Location: 32444 - 33541 (-)
Gene ID: HRGMv2_4147_7_28
Type: CAZyme
Location: 33578 - 34513 (+)
Gene ID: HRGMv2_4147_7_29
Type: pfam
Location: 34553 - 34825 (-)
Gene ID: HRGMv2_4147_7_30
Type:
Location: 35103 - 35246 (-)
Gene ID: HRGMv2_4147_7_31
Type: CAZyme
Location: 35922 - 36911 (-)
Gene ID: HRGMv2_4147_7_32
Type: TC
Location: 37002 - 38480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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