Cluster: HRGMv2_4147_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4147
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4147_7 | HRGMv2_4147_7_9 | 10680 | 13214 | - | 3.A.3.5.15 |
| pfam | HRGMv2_4147_7 | HRGMv2_4147_7_10 | 13501 | 13845 | - | Trns_repr_metal |
| CAZyme | HRGMv2_4147_7 | HRGMv2_4147_7_11 | 14555 | 16747 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_4147_7 | HRGMv2_4147_7_12 | 16917 | 17033 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4147_7 | HRGMv2_4147_7_13 | 17260 | 18372 | - | GT2 |
| CAZyme | HRGMv2_4147_7 | HRGMv2_4147_7_14 | 18609 | 19673 | + | GT2 |
| CAZyme | HRGMv2_4147_7 | HRGMv2_4147_7_15 | 19676 | 20815 | + | GT2 |
Gene ID: HRGMv2_4147_7_9
Type: TC
Location: 10680 - 13214 (-)
Type: TC
Location: 10680 - 13214 (-)
Gene ID: HRGMv2_4147_7_10
Type: pfam
Location: 13501 - 13845 (-)
Type: pfam
Location: 13501 - 13845 (-)
Gene ID: HRGMv2_4147_7_11
Type: CAZyme
Location: 14555 - 16747 (+)
Type: CAZyme
Location: 14555 - 16747 (+)
Gene ID: HRGMv2_4147_7_12
Type:
Location: 16917 - 17033 (-)
Type:
Location: 16917 - 17033 (-)
Gene ID: HRGMv2_4147_7_13
Type: CAZyme
Location: 17260 - 18372 (-)
Type: CAZyme
Location: 17260 - 18372 (-)
Gene ID: HRGMv2_4147_7_14
Type: CAZyme
Location: 18609 - 19673 (+)
Type: CAZyme
Location: 18609 - 19673 (+)
Gene ID: HRGMv2_4147_7_15
Type: CAZyme
Location: 19676 - 20815 (+)
Type: CAZyme
Location: 19676 - 20815 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.