Cluster: HRGMv2_4147_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4147
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4147_6 | HRGMv2_4147_6_27 | 32006 | 33070 | - | GT2 |
| TC | HRGMv2_4147_6 | HRGMv2_4147_6_28 | 33382 | 34527 | + | 9.B.146.1.4 |
| TF | HRGMv2_4147_6 | HRGMv2_4147_6_29 | 34555 | 36009 | - | GerE |
| pfam | HRGMv2_4147_6 | HRGMv2_4147_6_30 | 36128 | 37081 | - | CN_hydrolase |
| TC | HRGMv2_4147_6 | HRGMv2_4147_6_31 | 37189 | 38439 | - | 4.A.1.2.2 |
| TC | HRGMv2_4147_6 | HRGMv2_4147_6_32 | 38576 | 41686 | - | 3.A.1.137.2 |
| TC | HRGMv2_4147_6 | HRGMv2_4147_6_33 | 41693 | 42394 | - | 3.A.1.125.1 |
Gene ID: HRGMv2_4147_6_27
Type: CAZyme
Location: 32006 - 33070 (-)
Type: CAZyme
Location: 32006 - 33070 (-)
Gene ID: HRGMv2_4147_6_28
Type: TC
Location: 33382 - 34527 (+)
Type: TC
Location: 33382 - 34527 (+)
Gene ID: HRGMv2_4147_6_29
Type: TF
Location: 34555 - 36009 (-)
Type: TF
Location: 34555 - 36009 (-)
Gene ID: HRGMv2_4147_6_30
Type: pfam
Location: 36128 - 37081 (-)
Type: pfam
Location: 36128 - 37081 (-)
Gene ID: HRGMv2_4147_6_31
Type: TC
Location: 37189 - 38439 (-)
Type: TC
Location: 37189 - 38439 (-)
Gene ID: HRGMv2_4147_6_32
Type: TC
Location: 38576 - 41686 (-)
Type: TC
Location: 38576 - 41686 (-)
Gene ID: HRGMv2_4147_6_33
Type: TC
Location: 41693 - 42394 (-)
Type: TC
Location: 41693 - 42394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4147_6_27 | vegetarian > omnivore | 2.67866 | 0.00861 |