Cluster: HRGMv2_4147_CGC1
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4147
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4147_1 | HRGMv2_4147_1_3 | 4070 | 5317 | + | GT28 |
| STP | HRGMv2_4147_1 | HRGMv2_4147_1_4 | 5422 | 5682 | - | HMA |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_5 | 6217 | 8010 | - | 3.A.1.106.3 |
| NULL(UNKNOWN) | HRGMv2_4147_1 | HRGMv2_4147_1_6 | 8061 | 8306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_7 | 8332 | 8991 | + | 3.A.1.3.2 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_8 | 8972 | 9646 | + | 3.A.1.3.25 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_9 | 9650 | 10414 | + | 3.A.1.3.9 |
| STP | HRGMv2_4147_1 | HRGMv2_4147_1_10 | 10561 | 11103 | - | TetR_N |
| pfam | HRGMv2_4147_1 | HRGMv2_4147_1_11 | 11327 | 13147 | + | MCRA | NAD_binding_8 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_12 | 13511 | 14386 | + | 3.A.1.3.27 |
| STP | HRGMv2_4147_1 | HRGMv2_4147_1_13 | 14623 | 16233 | - | ACT |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_14 | 16515 | 18056 | - | 2.A.21.2.1 |
| NULL(UNKNOWN) | HRGMv2_4147_1 | HRGMv2_4147_1_15 | 18224 | 18478 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_16 | 18653 | 19399 | - | 3.A.1.5.22 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_17 | 19396 | 20181 | - | 3.A.1.5.38 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_18 | 20187 | 21734 | - | 3.A.1.5.20 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_19 | 21749 | 22612 | - | 3.A.1.5.11 |
| TC | HRGMv2_4147_1 | HRGMv2_4147_1_20 | 22609 | 23574 | - | 3.A.1.5.3 |
Gene ID: HRGMv2_4147_1_3
Type: CAZyme
Location: 4070 - 5317 (+)
Type: CAZyme
Location: 4070 - 5317 (+)
Gene ID: HRGMv2_4147_1_4
Type: STP
Location: 5422 - 5682 (-)
Type: STP
Location: 5422 - 5682 (-)
Gene ID: HRGMv2_4147_1_5
Type: TC
Location: 6217 - 8010 (-)
Type: TC
Location: 6217 - 8010 (-)
Gene ID: HRGMv2_4147_1_6
Type:
Location: 8061 - 8306 (+)
Type:
Location: 8061 - 8306 (+)
Gene ID: HRGMv2_4147_1_7
Type: TC
Location: 8332 - 8991 (+)
Type: TC
Location: 8332 - 8991 (+)
Gene ID: HRGMv2_4147_1_8
Type: TC
Location: 8972 - 9646 (+)
Type: TC
Location: 8972 - 9646 (+)
Gene ID: HRGMv2_4147_1_9
Type: TC
Location: 9650 - 10414 (+)
Type: TC
Location: 9650 - 10414 (+)
Gene ID: HRGMv2_4147_1_10
Type: STP
Location: 10561 - 11103 (-)
Type: STP
Location: 10561 - 11103 (-)
Gene ID: HRGMv2_4147_1_11
Type: pfam
Location: 11327 - 13147 (+)
Type: pfam
Location: 11327 - 13147 (+)
Gene ID: HRGMv2_4147_1_12
Type: TC
Location: 13511 - 14386 (+)
Type: TC
Location: 13511 - 14386 (+)
Gene ID: HRGMv2_4147_1_13
Type: STP
Location: 14623 - 16233 (-)
Type: STP
Location: 14623 - 16233 (-)
Gene ID: HRGMv2_4147_1_14
Type: TC
Location: 16515 - 18056 (-)
Type: TC
Location: 16515 - 18056 (-)
Gene ID: HRGMv2_4147_1_15
Type:
Location: 18224 - 18478 (-)
Type:
Location: 18224 - 18478 (-)
Gene ID: HRGMv2_4147_1_16
Type: TC
Location: 18653 - 19399 (-)
Type: TC
Location: 18653 - 19399 (-)
Gene ID: HRGMv2_4147_1_17
Type: TC
Location: 19396 - 20181 (-)
Type: TC
Location: 19396 - 20181 (-)
Gene ID: HRGMv2_4147_1_18
Type: TC
Location: 20187 - 21734 (-)
Type: TC
Location: 20187 - 21734 (-)
Gene ID: HRGMv2_4147_1_19
Type: TC
Location: 21749 - 22612 (-)
Type: TC
Location: 21749 - 22612 (-)
Gene ID: HRGMv2_4147_1_20
Type: TC
Location: 22609 - 23574 (-)
Type: TC
Location: 22609 - 23574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.