Cluster: HRGMv2_4146_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4146
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4146_8 | HRGMv2_4146_8_17 | 24213 | 26117 | - | 2.A.15.1.11 |
| NULL(UNKNOWN) | HRGMv2_4146_8 | HRGMv2_4146_8_18 | 26259 | 26831 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4146_8 | HRGMv2_4146_8_19 | 27399 | 28832 | - | LytR_cpsA_psr |
| CAZyme | HRGMv2_4146_8 | HRGMv2_4146_8_20 | 29136 | 30554 | + | AA4 |
Gene ID: HRGMv2_4146_8_17
Type: TC
Location: 24213 - 26117 (-)
Type: TC
Location: 24213 - 26117 (-)
Gene ID: HRGMv2_4146_8_18
Type:
Location: 26259 - 26831 (-)
Type:
Location: 26259 - 26831 (-)
Gene ID: HRGMv2_4146_8_19
Type: pfam
Location: 27399 - 28832 (-)
Type: pfam
Location: 27399 - 28832 (-)
Gene ID: HRGMv2_4146_8_20
Type: CAZyme
Location: 29136 - 30554 (+)
Type: CAZyme
Location: 29136 - 30554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4146_8_20 | vegetarian > omnivore | 1.47328 | 0.00364 |