Cluster: HRGMv2_4146_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4146
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4146_7 | HRGMv2_4146_7_27 | 49812 | 51161 | + | 2.A.66.1.37 |
| NULL(UNKNOWN) | HRGMv2_4146_7 | HRGMv2_4146_7_28 | 51249 | 51449 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4146_7 | HRGMv2_4146_7_29 | 51748 | 52776 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_4146_7 | HRGMv2_4146_7_30 | 52914 | 55868 | + | CBM13 | CBM13 | CBM13 | GH5_35 | GH73 |
| CAZyme | HRGMv2_4146_7 | HRGMv2_4146_7_31 | 56672 | 59179 | - | GT2 |
Gene ID: HRGMv2_4146_7_27
Type: TC
Location: 49812 - 51161 (+)
Type: TC
Location: 49812 - 51161 (+)
Gene ID: HRGMv2_4146_7_28
Type:
Location: 51249 - 51449 (-)
Type:
Location: 51249 - 51449 (-)
Gene ID: HRGMv2_4146_7_29
Type: pfam
Location: 51748 - 52776 (+)
Type: pfam
Location: 51748 - 52776 (+)
Gene ID: HRGMv2_4146_7_30
Type: CAZyme
Location: 52914 - 55868 (+)
Type: CAZyme
Location: 52914 - 55868 (+)
Gene ID: HRGMv2_4146_7_31
Type: CAZyme
Location: 56672 - 59179 (-)
Type: CAZyme
Location: 56672 - 59179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.