Cluster: HRGMv2_4146_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4146
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_120 | 142066 | 143925 | - | 3.B.1.1.6 |
| pfam | HRGMv2_4146_4 | HRGMv2_4146_4_121 | 144140 | 144700 | - | EFP | EFP_N | Elong-fact-P_C |
| peptidase | HRGMv2_4146_4 | HRGMv2_4146_4_122 | 144727 | 145881 | - | M24.UPB |
| CAZyme | HRGMv2_4146_4 | HRGMv2_4146_4_123 | 145968 | 147110 | - | GT8 |
Gene ID: HRGMv2_4146_4_120
Type: TC
Location: 142066 - 143925 (-)
Type: TC
Location: 142066 - 143925 (-)
Gene ID: HRGMv2_4146_4_121
Type: pfam
Location: 144140 - 144700 (-)
Type: pfam
Location: 144140 - 144700 (-)
Gene ID: HRGMv2_4146_4_122
Type: peptidase
Location: 144727 - 145881 (-)
Type: peptidase
Location: 144727 - 145881 (-)
Gene ID: HRGMv2_4146_4_123
Type: CAZyme
Location: 145968 - 147110 (-)
Type: CAZyme
Location: 145968 - 147110 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4146_4_121 | vegan > omnivore | 1.42254 | 0.04449 |