Cluster: HRGMv2_4146_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4146
- CGC Family ID: CGCFAM_09832
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_48 | 61018 | 61833 | - | 3.A.1.3.25 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_49 | 61841 | 63187 | - | 3.A.1.3.16 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_50 | 63294 | 64127 | - | 3.A.1.3.27 |
| pfam | HRGMv2_4146_4 | HRGMv2_4146_4_51 | 64248 | 64439 | - | Zn_Ribbon_1 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_52 | 64714 | 65370 | - | 5.A.3.9.1 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_53 | 65367 | 66893 | - | 5.A.3.3.1 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_54 | 66890 | 67972 | - | 5.A.3.3.2 |
| pfam | HRGMv2_4146_4 | HRGMv2_4146_4_55 | 68152 | 69294 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | HRGMv2_4146_4 | HRGMv2_4146_4_56 | 69399 | 70811 | - | His_Phos_1 |
| CAZyme | HRGMv2_4146_4 | HRGMv2_4146_4_57 | 71092 | 72060 | + | GT81 |
| TC | HRGMv2_4146_4 | HRGMv2_4146_4_58 | 72187 | 74640 | - | 5.A.3.3.2 |
Gene ID: HRGMv2_4146_4_48
Type: TC
Location: 61018 - 61833 (-)
Type: TC
Location: 61018 - 61833 (-)
Gene ID: HRGMv2_4146_4_49
Type: TC
Location: 61841 - 63187 (-)
Type: TC
Location: 61841 - 63187 (-)
Gene ID: HRGMv2_4146_4_50
Type: TC
Location: 63294 - 64127 (-)
Type: TC
Location: 63294 - 64127 (-)
Gene ID: HRGMv2_4146_4_51
Type: pfam
Location: 64248 - 64439 (-)
Type: pfam
Location: 64248 - 64439 (-)
Gene ID: HRGMv2_4146_4_52
Type: TC
Location: 64714 - 65370 (-)
Type: TC
Location: 64714 - 65370 (-)
Gene ID: HRGMv2_4146_4_53
Type: TC
Location: 65367 - 66893 (-)
Type: TC
Location: 65367 - 66893 (-)
Gene ID: HRGMv2_4146_4_54
Type: TC
Location: 66890 - 67972 (-)
Type: TC
Location: 66890 - 67972 (-)
Gene ID: HRGMv2_4146_4_55
Type: pfam
Location: 68152 - 69294 (+)
Type: pfam
Location: 68152 - 69294 (+)
Gene ID: HRGMv2_4146_4_56
Type: pfam
Location: 69399 - 70811 (-)
Type: pfam
Location: 69399 - 70811 (-)
Gene ID: HRGMv2_4146_4_57
Type: CAZyme
Location: 71092 - 72060 (+)
Type: CAZyme
Location: 71092 - 72060 (+)
Gene ID: HRGMv2_4146_4_58
Type: TC
Location: 72187 - 74640 (-)
Type: TC
Location: 72187 - 74640 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.