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Cluster: HRGMv2_4146_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4146_3 HRGMv2_4146_3_55 64718 66397 - 3.A.1.120.6
pfam HRGMv2_4146_3 HRGMv2_4146_3_56 66806 67369 + Flavin_Reduct
TC HRGMv2_4146_3 HRGMv2_4146_3_57 67573 68427 - 3.A.1.7.5
TC HRGMv2_4146_3 HRGMv2_4146_3_58 68459 69427 - 3.A.1.7.5
TC HRGMv2_4146_3 HRGMv2_4146_3_59 69429 70301 - 3.A.1.7.5
STP HRGMv2_4146_3 HRGMv2_4146_3_60 70329 71231 - LysR_substrate
NULL(UNKNOWN) HRGMv2_4146_3 HRGMv2_4146_3_61 71487 71867 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4146_3 HRGMv2_4146_3_62 72194 73141 + 2.A.69.3.6
pfam HRGMv2_4146_3 HRGMv2_4146_3_63 73175 74215 + CN_hydrolase
CAZyme HRGMv2_4146_3 HRGMv2_4146_3_64 74264 76384 + GH2
Gene ID: HRGMv2_4146_3_55
Type: TC
Location: 64718 - 66397 (-)
Gene ID: HRGMv2_4146_3_56
Type: pfam
Location: 66806 - 67369 (+)
Gene ID: HRGMv2_4146_3_57
Type: TC
Location: 67573 - 68427 (-)
Gene ID: HRGMv2_4146_3_58
Type: TC
Location: 68459 - 69427 (-)
Gene ID: HRGMv2_4146_3_59
Type: TC
Location: 69429 - 70301 (-)
Gene ID: HRGMv2_4146_3_60
Type: STP
Location: 70329 - 71231 (-)
Gene ID: HRGMv2_4146_3_61
Type:
Location: 71487 - 71867 (-)
Gene ID: HRGMv2_4146_3_62
Type: TC
Location: 72194 - 73141 (+)
Gene ID: HRGMv2_4146_3_63
Type: pfam
Location: 73175 - 74215 (+)
Gene ID: HRGMv2_4146_3_64
Type: CAZyme
Location: 74264 - 76384 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
Eggerthellaceae
→
Genus
UMGS1519
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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