Cluster: HRGMv2_4145_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4145
- CGC Family ID: CGCFAM_07676
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4145_2 | HRGMv2_4145_2_35 | 38753 | 39412 | + | 8.A.3.2.3 |
| TC | HRGMv2_4145_2 | HRGMv2_4145_2_36 | 39414 | 40262 | + | 8.A.3.2.1 |
| pfam | HRGMv2_4145_2 | HRGMv2_4145_2_37 | 40266 | 40910 | + | CpsB_CapC |
| TC | HRGMv2_4145_2 | HRGMv2_4145_2_38 | 40951 | 41802 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4145_2 | HRGMv2_4145_2_39 | 41799 | 42920 | + | GT4 |
Gene ID: HRGMv2_4145_2_35
Type: TC
Location: 38753 - 39412 (+)
Type: TC
Location: 38753 - 39412 (+)
Gene ID: HRGMv2_4145_2_36
Type: TC
Location: 39414 - 40262 (+)
Type: TC
Location: 39414 - 40262 (+)
Gene ID: HRGMv2_4145_2_37
Type: pfam
Location: 40266 - 40910 (+)
Type: pfam
Location: 40266 - 40910 (+)
Gene ID: HRGMv2_4145_2_38
Type: TC
Location: 40951 - 41802 (+)
Type: TC
Location: 40951 - 41802 (+)
Gene ID: HRGMv2_4145_2_39
Type: CAZyme
Location: 41799 - 42920 (+)
Type: CAZyme
Location: 41799 - 42920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia sp900553775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.