Cluster: HRGMv2_4145_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4145
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4145_1 | HRGMv2_4145_1_55 | 72393 | 73517 | + | CE9 |
| STP | HRGMv2_4145_1 | HRGMv2_4145_1_56 | 73599 | 74165 | - | TetR_N |
| NULL(UNKNOWN) | HRGMv2_4145_1 | HRGMv2_4145_1_57 | 74355 | 74837 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4145_1 | HRGMv2_4145_1_58 | 75477 | 76952 | + | 3.D.4.3.2 |
| TC | HRGMv2_4145_1 | HRGMv2_4145_1_59 | 76956 | 78011 | + | 3.D.4.3.2 |
Gene ID: HRGMv2_4145_1_55
Type: CAZyme
Location: 72393 - 73517 (+)
Type: CAZyme
Location: 72393 - 73517 (+)
Gene ID: HRGMv2_4145_1_56
Type: STP
Location: 73599 - 74165 (-)
Type: STP
Location: 73599 - 74165 (-)
Gene ID: HRGMv2_4145_1_57
Type:
Location: 74355 - 74837 (+)
Type:
Location: 74355 - 74837 (+)
Gene ID: HRGMv2_4145_1_58
Type: TC
Location: 75477 - 76952 (+)
Type: TC
Location: 75477 - 76952 (+)
Gene ID: HRGMv2_4145_1_59
Type: TC
Location: 76956 - 78011 (+)
Type: TC
Location: 76956 - 78011 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia sp900553775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.