dbCAN Logo

Cluster: HRGMv2_4144_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_51 65419 66561 - GT2
TC HRGMv2_4144_6 HRGMv2_4144_6_52 66600 68525 - 3.A.1.103.1
TC HRGMv2_4144_6 HRGMv2_4144_6_53 68538 69326 - 3.A.1.103.6
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_54 69571 71703 + GT2
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_55 71776 72771 + GT2
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_56 72774 74123 + GT2
pfam HRGMv2_4144_6 HRGMv2_4144_6_57 74241 76436 + DUF6541 | DUF6541
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_58 76573 77739 - GT4
pfam HRGMv2_4144_6 HRGMv2_4144_6_59 77939 78751 + LicD
NULL(UNKNOWN) HRGMv2_4144_6 HRGMv2_4144_6_60 78748 80028 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_61 80025 81149 + GT4
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_62 81146 81871 + GT2
pfam HRGMv2_4144_6 HRGMv2_4144_6_63 81876 82235 + DUF2304
TC HRGMv2_4144_6 HRGMv2_4144_6_64 82263 82919 - 9.B.18.1.2
STP HRGMv2_4144_6 HRGMv2_4144_6_65 82916 84364 - Aminotran_1_2
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_66 84467 85657 - GT4
CAZyme HRGMv2_4144_6 HRGMv2_4144_6_67 85923 88802 + CBM13 | CBM13 | CBM13
TC HRGMv2_4144_6 HRGMv2_4144_6_68 89131 90030 + 3.A.1.24.1
TC HRGMv2_4144_6 HRGMv2_4144_6_69 90031 90705 + 3.A.1.24.5
TC HRGMv2_4144_6 HRGMv2_4144_6_70 90839 91708 + 3.A.1.24.5
Gene ID: HRGMv2_4144_6_51
Type: CAZyme
Location: 65419 - 66561 (-)
Gene ID: HRGMv2_4144_6_52
Type: TC
Location: 66600 - 68525 (-)
Gene ID: HRGMv2_4144_6_53
Type: TC
Location: 68538 - 69326 (-)
Gene ID: HRGMv2_4144_6_54
Type: CAZyme
Location: 69571 - 71703 (+)
Gene ID: HRGMv2_4144_6_55
Type: CAZyme
Location: 71776 - 72771 (+)
Gene ID: HRGMv2_4144_6_56
Type: CAZyme
Location: 72774 - 74123 (+)
Gene ID: HRGMv2_4144_6_57
Type: pfam
Location: 74241 - 76436 (+)
Gene ID: HRGMv2_4144_6_58
Type: CAZyme
Location: 76573 - 77739 (-)
Gene ID: HRGMv2_4144_6_59
Type: pfam
Location: 77939 - 78751 (+)
Gene ID: HRGMv2_4144_6_60
Type:
Location: 78748 - 80028 (+)
Gene ID: HRGMv2_4144_6_61
Type: CAZyme
Location: 80025 - 81149 (+)
Gene ID: HRGMv2_4144_6_62
Type: CAZyme
Location: 81146 - 81871 (+)
Gene ID: HRGMv2_4144_6_63
Type: pfam
Location: 81876 - 82235 (+)
Gene ID: HRGMv2_4144_6_64
Type: TC
Location: 82263 - 82919 (-)
Gene ID: HRGMv2_4144_6_65
Type: STP
Location: 82916 - 84364 (-)
Gene ID: HRGMv2_4144_6_66
Type: CAZyme
Location: 84467 - 85657 (-)
Gene ID: HRGMv2_4144_6_67
Type: CAZyme
Location: 85923 - 88802 (+)
Gene ID: HRGMv2_4144_6_68
Type: TC
Location: 89131 - 90030 (+)
Gene ID: HRGMv2_4144_6_69
Type: TC
Location: 90031 - 90705 (+)
Gene ID: HRGMv2_4144_6_70
Type: TC
Location: 90839 - 91708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List