Cluster: HRGMv2_4144_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4144
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4144_2 | HRGMv2_4144_2_39 | 49872 | 51026 | - | GT2 |
| pfam | HRGMv2_4144_2 | HRGMv2_4144_2_40 | 51283 | 52164 | + | YdjC |
| TC | HRGMv2_4144_2 | HRGMv2_4144_2_41 | 52161 | 53600 | + | 2.A.66.1.32 |
| NULL(UNKNOWN) | HRGMv2_4144_2 | HRGMv2_4144_2_42 | 53874 | 55166 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4144_2 | HRGMv2_4144_2_43 | 55687 | 56532 | - | IspD | NTP_transf_3 |
| TC | HRGMv2_4144_2 | HRGMv2_4144_2_44 | 56986 | 59565 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_4144_2_39
Type: CAZyme
Location: 49872 - 51026 (-)
Type: CAZyme
Location: 49872 - 51026 (-)
Gene ID: HRGMv2_4144_2_40
Type: pfam
Location: 51283 - 52164 (+)
Type: pfam
Location: 51283 - 52164 (+)
Gene ID: HRGMv2_4144_2_41
Type: TC
Location: 52161 - 53600 (+)
Type: TC
Location: 52161 - 53600 (+)
Gene ID: HRGMv2_4144_2_42
Type:
Location: 53874 - 55166 (+)
Type:
Location: 53874 - 55166 (+)
Gene ID: HRGMv2_4144_2_43
Type: pfam
Location: 55687 - 56532 (-)
Type: pfam
Location: 55687 - 56532 (-)
Gene ID: HRGMv2_4144_2_44
Type: TC
Location: 56986 - 59565 (-)
Type: TC
Location: 56986 - 59565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Aveggerthella
Species
Aveggerthella stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.