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Cluster: HRGMv2_4143_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4143_2 HRGMv2_4143_2_158 148446 149237 - 3.A.1.28.2
TC HRGMv2_4143_2 HRGMv2_4143_2_159 149234 150187 - 3.A.1.26.9
TC HRGMv2_4143_2 HRGMv2_4143_2_160 150184 151038 - 3.A.1.26.7
pfam HRGMv2_4143_2 HRGMv2_4143_2_161 151035 151646 - ECF-ribofla_trS | 5TM-5TMR_LYT | ECF_trnsprt
NULL(UNKNOWN) HRGMv2_4143_2 HRGMv2_4143_2_162 151868 154210 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4143_2 HRGMv2_4143_2_163 154207 156075 - GH109
pfam HRGMv2_4143_2 HRGMv2_4143_2_164 156564 157628 + ADH_zinc_N | ADH_N
TC HRGMv2_4143_2 HRGMv2_4143_2_165 157738 158856 + 9.B.10.1.1
Gene ID: HRGMv2_4143_2_158
Type: TC
Location: 148446 - 149237 (-)
Gene ID: HRGMv2_4143_2_159
Type: TC
Location: 149234 - 150187 (-)
Gene ID: HRGMv2_4143_2_160
Type: TC
Location: 150184 - 151038 (-)
Gene ID: HRGMv2_4143_2_161
Type: pfam
Location: 151035 - 151646 (-)
Gene ID: HRGMv2_4143_2_162
Type:
Location: 151868 - 154210 (-)
Gene ID: HRGMv2_4143_2_163
Type: CAZyme
Location: 154207 - 156075 (-)
Gene ID: HRGMv2_4143_2_164
Type: pfam
Location: 156564 - 157628 (+)
Gene ID: HRGMv2_4143_2_165
Type: TC
Location: 157738 - 158856 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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