Cluster: HRGMv2_4143_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4143
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4143_9 | HRGMv2_4143_9_48 | 49729 | 50760 | + | 9.B.146.1.3 |
| pfam | HRGMv2_4143_9 | HRGMv2_4143_9_49 | 50859 | 52307 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_4143_9 | HRGMv2_4143_9_50 | 52319 | 53971 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_4143_9 | HRGMv2_4143_9_51 | 53955 | 55085 | + | GT28 |
Gene ID: HRGMv2_4143_9_48
Type: TC
Location: 49729 - 50760 (+)
Type: TC
Location: 49729 - 50760 (+)
Gene ID: HRGMv2_4143_9_49
Type: pfam
Location: 50859 - 52307 (+)
Type: pfam
Location: 50859 - 52307 (+)
Gene ID: HRGMv2_4143_9_50
Type: TC
Location: 52319 - 53971 (+)
Type: TC
Location: 52319 - 53971 (+)
Gene ID: HRGMv2_4143_9_51
Type: CAZyme
Location: 53955 - 55085 (+)
Type: CAZyme
Location: 53955 - 55085 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Leptogranulimonas
Species
Leptogranulimonas sp012584445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.