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Cluster: HRGMv2_4142_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4142_31 HRGMv2_4142_31_19 22128 22865 - 9.B.18.1.2
pfam HRGMv2_4142_31 HRGMv2_4142_31_20 22874 24004 - Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase
pfam HRGMv2_4142_31 HRGMv2_4142_31_21 23997 25688 - Wzy_C
CAZyme HRGMv2_4142_31 HRGMv2_4142_31_22 25682 26839 - GT4
pfam HRGMv2_4142_31 HRGMv2_4142_31_23 26832 28529 - MurJ
CAZyme HRGMv2_4142_31 HRGMv2_4142_31_24 28533 29636 - GT2
CAZyme HRGMv2_4142_31 HRGMv2_4142_31_25 29636 30697 - GT2
pfam HRGMv2_4142_31 HRGMv2_4142_31_26 31069 32184 + Glycos_transf_4
TC HRGMv2_4142_31 HRGMv2_4142_31_27 32353 34194 - 9.B.18.2.1
Gene ID: HRGMv2_4142_31_19
Type: TC
Location: 22128 - 22865 (-)
Gene ID: HRGMv2_4142_31_20
Type: pfam
Location: 22874 - 24004 (-)
Gene ID: HRGMv2_4142_31_21
Type: pfam
Location: 23997 - 25688 (-)
Gene ID: HRGMv2_4142_31_22
Type: CAZyme
Location: 25682 - 26839 (-)
Gene ID: HRGMv2_4142_31_23
Type: pfam
Location: 26832 - 28529 (-)
Gene ID: HRGMv2_4142_31_24
Type: CAZyme
Location: 28533 - 29636 (-)
Gene ID: HRGMv2_4142_31_25
Type: CAZyme
Location: 29636 - 30697 (-)
Gene ID: HRGMv2_4142_31_26
Type: pfam
Location: 31069 - 32184 (+)
Gene ID: HRGMv2_4142_31_27
Type: TC
Location: 32353 - 34194 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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