Cluster: HRGMv2_4142_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4142
- CGC Family ID: CGCFAM_01125
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4142_22 | HRGMv2_4142_22_21 | 25500 | 26375 | + | 8.A.3.1.2 |
| pfam | HRGMv2_4142_22 | HRGMv2_4142_22_22 | 26376 | 27029 | + | CpsB_CapC |
| pfam | HRGMv2_4142_22 | HRGMv2_4142_22_23 | 27608 | 28120 | + | NusG |
| TC | HRGMv2_4142_22 | HRGMv2_4142_22_24 | 28324 | 29154 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | HRGMv2_4142_22 | HRGMv2_4142_22_25 | 29170 | 29373 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4142_22 | HRGMv2_4142_22_26 | 29377 | 30690 | + | GT4 |
Gene ID: HRGMv2_4142_22_21
Type: TC
Location: 25500 - 26375 (+)
Type: TC
Location: 25500 - 26375 (+)
Gene ID: HRGMv2_4142_22_22
Type: pfam
Location: 26376 - 27029 (+)
Type: pfam
Location: 26376 - 27029 (+)
Gene ID: HRGMv2_4142_22_23
Type: pfam
Location: 27608 - 28120 (+)
Type: pfam
Location: 27608 - 28120 (+)
Gene ID: HRGMv2_4142_22_24
Type: TC
Location: 28324 - 29154 (+)
Type: TC
Location: 28324 - 29154 (+)
Gene ID: HRGMv2_4142_22_25
Type:
Location: 29170 - 29373 (+)
Type:
Location: 29170 - 29373 (+)
Gene ID: HRGMv2_4142_22_26
Type: CAZyme
Location: 29377 - 30690 (+)
Type: CAZyme
Location: 29377 - 30690 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
CAJFUR01
Species
CAJFUR01 sp904420575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.