Cluster: HRGMv2_4142_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4142
- CGC Family ID: CGCFAM_02910
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4142_2 | HRGMv2_4142_2_130 | 148819 | 149706 | + | 3.A.1.149.1 |
| pfam | HRGMv2_4142_2 | HRGMv2_4142_2_131 | 149703 | 150404 | + | ABC2_membrane_5 |
| pfam | HRGMv2_4142_2 | HRGMv2_4142_2_132 | 150432 | 151127 | + | ABC2_membrane_5 |
| CAZyme | HRGMv2_4142_2 | HRGMv2_4142_2_133 | 151276 | 152022 | + | GT51 |
| TC | HRGMv2_4142_2 | HRGMv2_4142_2_134 | 152521 | 153840 | + | 2.A.1.21.22 |
Gene ID: HRGMv2_4142_2_130
Type: TC
Location: 148819 - 149706 (+)
Type: TC
Location: 148819 - 149706 (+)
Gene ID: HRGMv2_4142_2_131
Type: pfam
Location: 149703 - 150404 (+)
Type: pfam
Location: 149703 - 150404 (+)
Gene ID: HRGMv2_4142_2_132
Type: pfam
Location: 150432 - 151127 (+)
Type: pfam
Location: 150432 - 151127 (+)
Gene ID: HRGMv2_4142_2_133
Type: CAZyme
Location: 151276 - 152022 (+)
Type: CAZyme
Location: 151276 - 152022 (+)
Gene ID: HRGMv2_4142_2_134
Type: TC
Location: 152521 - 153840 (+)
Type: TC
Location: 152521 - 153840 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
CAJFUR01
Species
CAJFUR01 sp904420575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.