Cluster: HRGMv2_4126_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4126
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4126_14 | HRGMv2_4126_14_1 | 238 | 1416 | - | 3.A.1.1.26 |
| CAZyme | HRGMv2_4126_14 | HRGMv2_4126_14_2 | 1540 | 3804 | - | GT35 |
| CAZyme | HRGMv2_4126_14 | HRGMv2_4126_14_3 | 3826 | 5514 | - | GH77 |
| TF | HRGMv2_4126_14 | HRGMv2_4126_14_4 | 5588 | 6607 | - | LacI |
| TC | HRGMv2_4126_14 | HRGMv2_4126_14_5 | 6613 | 7452 | - | 3.A.1.1.45 |
| TC | HRGMv2_4126_14 | HRGMv2_4126_14_6 | 7452 | 8294 | - | 3.A.1.1.45 |
| TC | HRGMv2_4126_14 | HRGMv2_4126_14_7 | 8434 | 9771 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_4126_14_1
Type: TC
Location: 238 - 1416 (-)
Type: TC
Location: 238 - 1416 (-)
Gene ID: HRGMv2_4126_14_2
Type: CAZyme
Location: 1540 - 3804 (-)
Type: CAZyme
Location: 1540 - 3804 (-)
Gene ID: HRGMv2_4126_14_3
Type: CAZyme
Location: 3826 - 5514 (-)
Type: CAZyme
Location: 3826 - 5514 (-)
Gene ID: HRGMv2_4126_14_4
Type: TF
Location: 5588 - 6607 (-)
Type: TF
Location: 5588 - 6607 (-)
Gene ID: HRGMv2_4126_14_5
Type: TC
Location: 6613 - 7452 (-)
Type: TC
Location: 6613 - 7452 (-)
Gene ID: HRGMv2_4126_14_6
Type: TC
Location: 7452 - 8294 (-)
Type: TC
Location: 7452 - 8294 (-)
Gene ID: HRGMv2_4126_14_7
Type: TC
Location: 8434 - 9771 (-)
Type: TC
Location: 8434 - 9771 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Fannyhessea
Species
Fannyhessea sp947090525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.