Cluster: HRGMv2_4121_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4121
- CGC Family ID: CGCFAM_00125
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4121_38 | HRGMv2_4121_38_1 | 2 | 1762 | - | GH25 |
| pfam | HRGMv2_4121_38 | HRGMv2_4121_38_2 | 1783 | 2238 | - | CTP_transf_like |
| CAZyme | HRGMv2_4121_38 | HRGMv2_4121_38_3 | 2357 | 3379 | - | GT2 |
| pfam | HRGMv2_4121_38 | HRGMv2_4121_38_4 | 3662 | 4675 | - | NAD_Gly3P_dh_N | ApbA | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | HRGMv2_4121_38 | HRGMv2_4121_38_5 | 4786 | 5976 | - | 9.B.146.1.1 |
| TC | HRGMv2_4121_38 | HRGMv2_4121_38_6 | 5977 | 6786 | - | 3.A.1.103.1 |
| TC | HRGMv2_4121_38 | HRGMv2_4121_38_7 | 6776 | 7588 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_4121_38_1
Type: CAZyme
Location: 2 - 1762 (-)
Type: CAZyme
Location: 2 - 1762 (-)
Gene ID: HRGMv2_4121_38_2
Type: pfam
Location: 1783 - 2238 (-)
Type: pfam
Location: 1783 - 2238 (-)
Gene ID: HRGMv2_4121_38_3
Type: CAZyme
Location: 2357 - 3379 (-)
Type: CAZyme
Location: 2357 - 3379 (-)
Gene ID: HRGMv2_4121_38_4
Type: pfam
Location: 3662 - 4675 (-)
Type: pfam
Location: 3662 - 4675 (-)
Gene ID: HRGMv2_4121_38_5
Type: TC
Location: 4786 - 5976 (-)
Type: TC
Location: 4786 - 5976 (-)
Gene ID: HRGMv2_4121_38_6
Type: TC
Location: 5977 - 6786 (-)
Type: TC
Location: 5977 - 6786 (-)
Gene ID: HRGMv2_4121_38_7
Type: TC
Location: 6776 - 7588 (-)
Type: TC
Location: 6776 - 7588 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia equolifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.