Cluster: HRGMv2_4121_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4121
- CGC Family ID: CGCFAM_01460
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4121_16 | HRGMv2_4121_16_6 | 8801 | 10642 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_4121_16 | HRGMv2_4121_16_7 | 10837 | 11469 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4121_16 | HRGMv2_4121_16_8 | 11688 | 12458 | + | GT51 |
| NULL(UNKNOWN) | HRGMv2_4121_16 | HRGMv2_4121_16_9 | 12550 | 12819 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4121_16 | HRGMv2_4121_16_10 | 13795 | 15315 | + | 3.A.1.120.2 |
Gene ID: HRGMv2_4121_16_6
Type: TC
Location: 8801 - 10642 (-)
Type: TC
Location: 8801 - 10642 (-)
Gene ID: HRGMv2_4121_16_7
Type:
Location: 10837 - 11469 (+)
Type:
Location: 10837 - 11469 (+)
Gene ID: HRGMv2_4121_16_8
Type: CAZyme
Location: 11688 - 12458 (+)
Type: CAZyme
Location: 11688 - 12458 (+)
Gene ID: HRGMv2_4121_16_9
Type:
Location: 12550 - 12819 (-)
Type:
Location: 12550 - 12819 (-)
Gene ID: HRGMv2_4121_16_10
Type: TC
Location: 13795 - 15315 (+)
Type: TC
Location: 13795 - 15315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia equolifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.