Cluster: HRGMv2_4108_CGC15
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4108
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_3 | 3453 | 4388 | - | 8.A.5.1.7 |
| NULL(UNKNOWN) | HRGMv2_4108_24 | HRGMv2_4108_24_4 | 4419 | 5054 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4108_24 | HRGMv2_4108_24_5 | 5051 | 7225 | - | GH2 |
| CAZyme | HRGMv2_4108_24 | HRGMv2_4108_24_6 | 7251 | 8753 | - | GH51_1 |
| TF | HRGMv2_4108_24 | HRGMv2_4108_24_7 | 8756 | 10273 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_8 | 10251 | 11921 | - | 8.A.59.2.1 |
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_9 | 12048 | 12890 | - | 3.A.1.1.18 |
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_10 | 12902 | 13792 | - | 3.A.1.1.7 |
| STP | HRGMv2_4108_24 | HRGMv2_4108_24_11 | 13907 | 15223 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4108_24 | HRGMv2_4108_24_12 | 15713 | 18142 | - | GH38 |
| NULL(UNKNOWN) | HRGMv2_4108_24 | HRGMv2_4108_24_13 | 18543 | 18878 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4108_24 | HRGMv2_4108_24_14 | 19137 | 20396 | - | GlcNAc_2-epim |
| CAZyme | HRGMv2_4108_24 | HRGMv2_4108_24_15 | 20987 | 23752 | + | GH38 |
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_16 | 23773 | 24687 | + | 3.A.1.1.20 |
| TC | HRGMv2_4108_24 | HRGMv2_4108_24_17 | 24701 | 25531 | + | 3.A.1.1.34 |
Gene ID: HRGMv2_4108_24_3
Type: TC
Location: 3453 - 4388 (-)
Type: TC
Location: 3453 - 4388 (-)
Gene ID: HRGMv2_4108_24_4
Type:
Location: 4419 - 5054 (-)
Type:
Location: 4419 - 5054 (-)
Gene ID: HRGMv2_4108_24_5
Type: CAZyme
Location: 5051 - 7225 (-)
Type: CAZyme
Location: 5051 - 7225 (-)
Gene ID: HRGMv2_4108_24_6
Type: CAZyme
Location: 7251 - 8753 (-)
Type: CAZyme
Location: 7251 - 8753 (-)
Gene ID: HRGMv2_4108_24_7
Type: TF
Location: 8756 - 10273 (-)
Type: TF
Location: 8756 - 10273 (-)
Gene ID: HRGMv2_4108_24_8
Type: TC
Location: 10251 - 11921 (-)
Type: TC
Location: 10251 - 11921 (-)
Gene ID: HRGMv2_4108_24_9
Type: TC
Location: 12048 - 12890 (-)
Type: TC
Location: 12048 - 12890 (-)
Gene ID: HRGMv2_4108_24_10
Type: TC
Location: 12902 - 13792 (-)
Type: TC
Location: 12902 - 13792 (-)
Gene ID: HRGMv2_4108_24_11
Type: STP
Location: 13907 - 15223 (-)
Type: STP
Location: 13907 - 15223 (-)
Gene ID: HRGMv2_4108_24_12
Type: CAZyme
Location: 15713 - 18142 (-)
Type: CAZyme
Location: 15713 - 18142 (-)
Gene ID: HRGMv2_4108_24_13
Type:
Location: 18543 - 18878 (+)
Type:
Location: 18543 - 18878 (+)
Gene ID: HRGMv2_4108_24_14
Type: pfam
Location: 19137 - 20396 (-)
Type: pfam
Location: 19137 - 20396 (-)
Gene ID: HRGMv2_4108_24_15
Type: CAZyme
Location: 20987 - 23752 (+)
Type: CAZyme
Location: 20987 - 23752 (+)
Gene ID: HRGMv2_4108_24_16
Type: TC
Location: 23773 - 24687 (+)
Type: TC
Location: 23773 - 24687 (+)
Gene ID: HRGMv2_4108_24_17
Type: TC
Location: 24701 - 25531 (+)
Type: TC
Location: 24701 - 25531 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA2862
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.