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Cluster: HRGMv2_4108_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4108_20 HRGMv2_4108_20_19 18335 19354 - GH43_8
CAZyme HRGMv2_4108_20 HRGMv2_4108_20_20 19518 20528 - GH137
TF HRGMv2_4108_20 HRGMv2_4108_20_21 20646 21527 - HTH_AraC | HTH_AraC
STP HRGMv2_4108_20 HRGMv2_4108_20_22 21796 23400 + SBP_bac_1
TC HRGMv2_4108_20 HRGMv2_4108_20_23 23502 24452 + 3.A.1.1.10
TC HRGMv2_4108_20 HRGMv2_4108_20_24 24472 25383 + 3.A.1.1.29
CAZyme HRGMv2_4108_20 HRGMv2_4108_20_25 25427 26443 + GH43_8
pfam HRGMv2_4108_20 HRGMv2_4108_20_26 26457 27482 + Glyco_hydro_32N | Glyco_hydro_43
CAZyme HRGMv2_4108_20 HRGMv2_4108_20_27 27488 29419 + GH127
CAZyme HRGMv2_4108_20 HRGMv2_4108_20_28 29553 30650 + GH51_1
Gene ID: HRGMv2_4108_20_19
Type: CAZyme
Location: 18335 - 19354 (-)
Gene ID: HRGMv2_4108_20_20
Type: CAZyme
Location: 19518 - 20528 (-)
Gene ID: HRGMv2_4108_20_21
Type: TF
Location: 20646 - 21527 (-)
Gene ID: HRGMv2_4108_20_22
Type: STP
Location: 21796 - 23400 (+)
Gene ID: HRGMv2_4108_20_23
Type: TC
Location: 23502 - 24452 (+)
Gene ID: HRGMv2_4108_20_24
Type: TC
Location: 24472 - 25383 (+)
Gene ID: HRGMv2_4108_20_25
Type: CAZyme
Location: 25427 - 26443 (+)
Gene ID: HRGMv2_4108_20_26
Type: pfam
Location: 26457 - 27482 (+)
Gene ID: HRGMv2_4108_20_27
Type: CAZyme
Location: 27488 - 29419 (+)
Gene ID: HRGMv2_4108_20_28
Type: CAZyme
Location: 29553 - 30650 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
UBA2862
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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