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Cluster: HRGMv2_4108_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4108_1 HRGMv2_4108_1_5 4933 7611 + 8.A.59.2.1
STP HRGMv2_4108_1 HRGMv2_4108_1_6 7727 9289 + SBP_bac_1
pfam HRGMv2_4108_1 HRGMv2_4108_1_7 9446 10504 + Amidohydro_2
TC HRGMv2_4108_1 HRGMv2_4108_1_8 10546 11484 + 3.A.1.1.10
TC HRGMv2_4108_1 HRGMv2_4108_1_9 11499 12380 + 3.A.1.1.10
CAZyme HRGMv2_4108_1 HRGMv2_4108_1_10 12397 13797 + GH4
STP HRGMv2_4108_1 HRGMv2_4108_1_11 13776 14708 + PfkB
CAZyme HRGMv2_4108_1 HRGMv2_4108_1_12 14947 17001 + GH42
NULL(UNKNOWN) HRGMv2_4108_1 HRGMv2_4108_1_13 17154 17408 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4108_1 HRGMv2_4108_1_14 17435 17833 + 2.A.115.2.15
Gene ID: HRGMv2_4108_1_5
Type: TC
Location: 4933 - 7611 (+)
Gene ID: HRGMv2_4108_1_6
Type: STP
Location: 7727 - 9289 (+)
Gene ID: HRGMv2_4108_1_7
Type: pfam
Location: 9446 - 10504 (+)
Gene ID: HRGMv2_4108_1_8
Type: TC
Location: 10546 - 11484 (+)
Gene ID: HRGMv2_4108_1_9
Type: TC
Location: 11499 - 12380 (+)
Gene ID: HRGMv2_4108_1_10
Type: CAZyme
Location: 12397 - 13797 (+)
Gene ID: HRGMv2_4108_1_11
Type: STP
Location: 13776 - 14708 (+)
Gene ID: HRGMv2_4108_1_12
Type: CAZyme
Location: 14947 - 17001 (+)
Gene ID: HRGMv2_4108_1_13
Type:
Location: 17154 - 17408 (+)
Gene ID: HRGMv2_4108_1_14
Type: TC
Location: 17435 - 17833 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
UBA2862
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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