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Cluster: HRGMv2_4107_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4107_105 HRGMv2_4107_105_1 127 1236 + 2.A.45.2.6
TC HRGMv2_4107_105 HRGMv2_4107_105_2 1319 2155 + 3.A.1.132.3
CAZyme HRGMv2_4107_105 HRGMv2_4107_105_3 2236 3600 + GH28
STP HRGMv2_4107_105 HRGMv2_4107_105_4 3803 4543 - TPR_2
pfam HRGMv2_4107_105 HRGMv2_4107_105_5 4536 5384 - DUF5685
TC HRGMv2_4107_105 HRGMv2_4107_105_6 5387 7156 - 1.A.33.1.4
TF HRGMv2_4107_105 HRGMv2_4107_105_7 7821 8660 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4107_105 HRGMv2_4107_105_8 8849 10180 + GH4
Gene ID: HRGMv2_4107_105_1
Type: TC
Location: 127 - 1236 (+)
Gene ID: HRGMv2_4107_105_2
Type: TC
Location: 1319 - 2155 (+)
Gene ID: HRGMv2_4107_105_3
Type: CAZyme
Location: 2236 - 3600 (+)
Gene ID: HRGMv2_4107_105_4
Type: STP
Location: 3803 - 4543 (-)
Gene ID: HRGMv2_4107_105_5
Type: pfam
Location: 4536 - 5384 (-)
Gene ID: HRGMv2_4107_105_6
Type: TC
Location: 5387 - 7156 (-)
Gene ID: HRGMv2_4107_105_7
Type: TF
Location: 7821 - 8660 (-)
Gene ID: HRGMv2_4107_105_8
Type: CAZyme
Location: 8849 - 10180 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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