Cluster: HRGMv2_4107_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4107
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4107_48 | HRGMv2_4107_48_9 | 11702 | 13240 | + | 2.A.14.1.3 |
| pfam | HRGMv2_4107_48 | HRGMv2_4107_48_10 | 13372 | 14322 | + | Ldh_1_N | Ldh_1_C |
| CAZyme | HRGMv2_4107_48 | HRGMv2_4107_48_11 | 14519 | 15844 | + | GH10 |
| CAZyme | HRGMv2_4107_48 | HRGMv2_4107_48_12 | 15864 | 17186 | + | GH10 |
| CAZyme | HRGMv2_4107_48 | HRGMv2_4107_48_13 | 17204 | 18532 | + | GH10 |
Gene ID: HRGMv2_4107_48_9
Type: TC
Location: 11702 - 13240 (+)
Type: TC
Location: 11702 - 13240 (+)
Gene ID: HRGMv2_4107_48_10
Type: pfam
Location: 13372 - 14322 (+)
Type: pfam
Location: 13372 - 14322 (+)
Gene ID: HRGMv2_4107_48_11
Type: CAZyme
Location: 14519 - 15844 (+)
Type: CAZyme
Location: 14519 - 15844 (+)
Gene ID: HRGMv2_4107_48_12
Type: CAZyme
Location: 15864 - 17186 (+)
Type: CAZyme
Location: 15864 - 17186 (+)
Gene ID: HRGMv2_4107_48_13
Type: CAZyme
Location: 17204 - 18532 (+)
Type: CAZyme
Location: 17204 - 18532 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
CAKUFI01
Species
CAKUFI01 sp934647305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4107_48_9 | vegetarian > vegan | 1.36686 | 0.00066 |
| HRGMv2_4107_48_10 | vegetarian > vegan | 1.56854 | 0.00066 |