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Cluster: HRGMv2_4107_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4107_46 HRGMv2_4107_46_8 9174 10397 + 3.A.1.1.20
pfam HRGMv2_4107_46 HRGMv2_4107_46_9 10477 11478 + Metallophos
TC HRGMv2_4107_46 HRGMv2_4107_46_10 11590 12462 + 3.A.1.1.3
TC HRGMv2_4107_46 HRGMv2_4107_46_11 12459 13334 + 3.A.1.1.34
CAZyme HRGMv2_4107_46 HRGMv2_4107_46_12 14141 15238 - GH179
pfam HRGMv2_4107_46 HRGMv2_4107_46_13 15629 17020 - ROK
CAZyme HRGMv2_4107_46 HRGMv2_4107_46_14 17397 18530 - CE9
Gene ID: HRGMv2_4107_46_8
Type: TC
Location: 9174 - 10397 (+)
Gene ID: HRGMv2_4107_46_9
Type: pfam
Location: 10477 - 11478 (+)
Gene ID: HRGMv2_4107_46_10
Type: TC
Location: 11590 - 12462 (+)
Gene ID: HRGMv2_4107_46_11
Type: TC
Location: 12459 - 13334 (+)
Gene ID: HRGMv2_4107_46_12
Type: CAZyme
Location: 14141 - 15238 (-)
Gene ID: HRGMv2_4107_46_13
Type: pfam
Location: 15629 - 17020 (-)
Gene ID: HRGMv2_4107_46_14
Type: CAZyme
Location: 17397 - 18530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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