Cluster: HRGMv2_4107_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4107
- CGC Family ID: CGCFAM_01639
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4107_25 | HRGMv2_4107_25_9 | 12845 | 13765 | + | 3.A.1.1.10 |
| TC | HRGMv2_4107_25 | HRGMv2_4107_25_10 | 13784 | 14716 | + | 3.A.1.1.10 |
| STP | HRGMv2_4107_25 | HRGMv2_4107_25_11 | 14785 | 16488 | + | SBP_bac_1 |
| TF | HRGMv2_4107_25 | HRGMv2_4107_25_12 | 16959 | 19025 | + | HTH_AraC |
| CAZyme | HRGMv2_4107_25 | HRGMv2_4107_25_13 | 19000 | 21321 | + | GH95 |
Gene ID: HRGMv2_4107_25_9
Type: TC
Location: 12845 - 13765 (+)
Type: TC
Location: 12845 - 13765 (+)
Gene ID: HRGMv2_4107_25_10
Type: TC
Location: 13784 - 14716 (+)
Type: TC
Location: 13784 - 14716 (+)
Gene ID: HRGMv2_4107_25_11
Type: STP
Location: 14785 - 16488 (+)
Type: STP
Location: 14785 - 16488 (+)
Gene ID: HRGMv2_4107_25_12
Type: TF
Location: 16959 - 19025 (+)
Type: TF
Location: 16959 - 19025 (+)
Gene ID: HRGMv2_4107_25_13
Type: CAZyme
Location: 19000 - 21321 (+)
Type: CAZyme
Location: 19000 - 21321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
CAKUFI01
Species
CAKUFI01 sp934647305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.