dbCAN Logo

Cluster: HRGMv2_4107_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4107_16 HRGMv2_4107_16_22 19823 20764 + 3.A.1.1.10
TC HRGMv2_4107_16 HRGMv2_4107_16_23 20781 21737 + 3.A.1.1.10
CAZyme HRGMv2_4107_16 HRGMv2_4107_16_24 21774 23102 + GH13
NULL(UNKNOWN) HRGMv2_4107_16 HRGMv2_4107_16_25 23179 23583 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4107_16 HRGMv2_4107_16_26 23908 25839 + SBP_bac_5
TC HRGMv2_4107_16 HRGMv2_4107_16_27 25968 26921 + 3.A.1.5.2
TC HRGMv2_4107_16 HRGMv2_4107_16_28 26921 27934 + 3.A.1.5.25
TC HRGMv2_4107_16 HRGMv2_4107_16_29 27950 30025 + 3.A.1.5.11
Gene ID: HRGMv2_4107_16_22
Type: TC
Location: 19823 - 20764 (+)
Gene ID: HRGMv2_4107_16_23
Type: TC
Location: 20781 - 21737 (+)
Gene ID: HRGMv2_4107_16_24
Type: CAZyme
Location: 21774 - 23102 (+)
Gene ID: HRGMv2_4107_16_25
Type:
Location: 23179 - 23583 (-)
Gene ID: HRGMv2_4107_16_26
Type: STP
Location: 23908 - 25839 (+)
Gene ID: HRGMv2_4107_16_27
Type: TC
Location: 25968 - 26921 (+)
Gene ID: HRGMv2_4107_16_28
Type: TC
Location: 26921 - 27934 (+)
Gene ID: HRGMv2_4107_16_29
Type: TC
Location: 27950 - 30025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List