Cluster: HRGMv2_4106_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4106
- CGC Family ID: CGCFAM_00074
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4106_85 | HRGMv2_4106_85_41 | 42431 | 43123 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4106_85 | HRGMv2_4106_85_42 | 43139 | 44248 | + | GT4 |
| pfam | HRGMv2_4106_85 | HRGMv2_4106_85_43 | 44428 | 45222 | + | ABC2_membrane |
| TC | HRGMv2_4106_85 | HRGMv2_4106_85_44 | 45231 | 46043 | + | 3.A.1.103.1 |
Gene ID: HRGMv2_4106_85_41
Type: TC
Location: 42431 - 43123 (+)
Type: TC
Location: 42431 - 43123 (+)
Gene ID: HRGMv2_4106_85_42
Type: CAZyme
Location: 43139 - 44248 (+)
Type: CAZyme
Location: 43139 - 44248 (+)
Gene ID: HRGMv2_4106_85_43
Type: pfam
Location: 44428 - 45222 (+)
Type: pfam
Location: 44428 - 45222 (+)
Gene ID: HRGMv2_4106_85_44
Type: TC
Location: 45231 - 46043 (+)
Type: TC
Location: 45231 - 46043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp949287815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.