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Cluster: HRGMv2_4106_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4106_76 HRGMv2_4106_76_10 9222 10130 + 3.A.1.7.5
TC HRGMv2_4106_76 HRGMv2_4106_76_11 10141 11067 + 3.A.1.7.5
TC HRGMv2_4106_76 HRGMv2_4106_76_12 11111 11905 + 3.A.1.7.5
pfam HRGMv2_4106_76 HRGMv2_4106_76_13 11907 12566 + PhoU | PhoU
TC HRGMv2_4106_76 HRGMv2_4106_76_14 12751 14382 + 2.A.58.2.2
TF HRGMv2_4106_76 HRGMv2_4106_76_15 14458 15114 + Trans_reg_C
STP HRGMv2_4106_76 HRGMv2_4106_76_16 15164 16831 + HATPase_c | HisKA
CAZyme HRGMv2_4106_76 HRGMv2_4106_76_17 17077 18276 + GH29
Gene ID: HRGMv2_4106_76_10
Type: TC
Location: 9222 - 10130 (+)
Gene ID: HRGMv2_4106_76_11
Type: TC
Location: 10141 - 11067 (+)
Gene ID: HRGMv2_4106_76_12
Type: TC
Location: 11111 - 11905 (+)
Gene ID: HRGMv2_4106_76_13
Type: pfam
Location: 11907 - 12566 (+)
Gene ID: HRGMv2_4106_76_14
Type: TC
Location: 12751 - 14382 (+)
Gene ID: HRGMv2_4106_76_15
Type: TF
Location: 14458 - 15114 (+)
Gene ID: HRGMv2_4106_76_16
Type: STP
Location: 15164 - 16831 (+)
Gene ID: HRGMv2_4106_76_17
Type: CAZyme
Location: 17077 - 18276 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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