Cluster: HRGMv2_4106_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4106
- CGC Family ID: CGCFAM_01987
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4106_15 | HRGMv2_4106_15_12 | 9056 | 9937 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_4106_15 | HRGMv2_4106_15_13 | 9934 | 12966 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4106_15 | HRGMv2_4106_15_14 | 12978 | 14870 | + | GH163 |
| pfam | HRGMv2_4106_15 | HRGMv2_4106_15_15 | 14897 | 17815 | + | Big_2 | Big-like |
| pfam | HRGMv2_4106_15 | HRGMv2_4106_15_16 | 17828 | 19123 | + | BNR_2 |
| CAZyme | HRGMv2_4106_15 | HRGMv2_4106_15_17 | 19137 | 20951 | + | GH20 |
Gene ID: HRGMv2_4106_15_12
Type: TC
Location: 9056 - 9937 (+)
Type: TC
Location: 9056 - 9937 (+)
Gene ID: HRGMv2_4106_15_13
Type:
Location: 9934 - 12966 (+)
Type:
Location: 9934 - 12966 (+)
Gene ID: HRGMv2_4106_15_14
Type: CAZyme
Location: 12978 - 14870 (+)
Type: CAZyme
Location: 12978 - 14870 (+)
Gene ID: HRGMv2_4106_15_15
Type: pfam
Location: 14897 - 17815 (+)
Type: pfam
Location: 14897 - 17815 (+)
Gene ID: HRGMv2_4106_15_16
Type: pfam
Location: 17828 - 19123 (+)
Type: pfam
Location: 17828 - 19123 (+)
Gene ID: HRGMv2_4106_15_17
Type: CAZyme
Location: 19137 - 20951 (+)
Type: CAZyme
Location: 19137 - 20951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp949287815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.