Cluster: HRGMv2_4106_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4106
- CGC Family ID: CGCFAM_00292
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4106_72 | HRGMv2_4106_72_4 | 4794 | 9527 | + | CBM67 |
| STP | HRGMv2_4106_72 | HRGMv2_4106_72_5 | 9592 | 10968 | + | SBP_bac_1 |
| TC | HRGMv2_4106_72 | HRGMv2_4106_72_6 | 11043 | 11978 | + | 3.A.1.1.28 |
| TC | HRGMv2_4106_72 | HRGMv2_4106_72_7 | 11978 | 12883 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_4106_72 | HRGMv2_4106_72_8 | 12927 | 15398 | + | GH106 |
Gene ID: HRGMv2_4106_72_4
Type: CAZyme
Location: 4794 - 9527 (+)
Type: CAZyme
Location: 4794 - 9527 (+)
Gene ID: HRGMv2_4106_72_5
Type: STP
Location: 9592 - 10968 (+)
Type: STP
Location: 9592 - 10968 (+)
Gene ID: HRGMv2_4106_72_6
Type: TC
Location: 11043 - 11978 (+)
Type: TC
Location: 11043 - 11978 (+)
Gene ID: HRGMv2_4106_72_7
Type: TC
Location: 11978 - 12883 (+)
Type: TC
Location: 11978 - 12883 (+)
Gene ID: HRGMv2_4106_72_8
Type: CAZyme
Location: 12927 - 15398 (+)
Type: CAZyme
Location: 12927 - 15398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp949287815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.