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Cluster: HRGMv2_4106_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4106_62 HRGMv2_4106_62_15 15095 16654 - GH39
pfam HRGMv2_4106_62 HRGMv2_4106_62_16 16756 17952 - Oxidored_FMN
TC HRGMv2_4106_62 HRGMv2_4106_62_17 18151 21162 - 1.C.39.4.6
pfam HRGMv2_4106_62 HRGMv2_4106_62_18 21245 25939 - Flg_new | Flg_new | Pect-lyase_RHGA_epim
NULL(UNKNOWN) HRGMv2_4106_62 HRGMv2_4106_62_19 26017 27978 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4106_62 HRGMv2_4106_62_20 28011 28946 - 3.A.1.1.29
TC HRGMv2_4106_62 HRGMv2_4106_62_21 28959 29942 - 3.A.1.1.10
CAZyme HRGMv2_4106_62 HRGMv2_4106_62_22 30144 31502 - GH1
Gene ID: HRGMv2_4106_62_15
Type: CAZyme
Location: 15095 - 16654 (-)
Gene ID: HRGMv2_4106_62_16
Type: pfam
Location: 16756 - 17952 (-)
Gene ID: HRGMv2_4106_62_17
Type: TC
Location: 18151 - 21162 (-)
Gene ID: HRGMv2_4106_62_18
Type: pfam
Location: 21245 - 25939 (-)
Gene ID: HRGMv2_4106_62_19
Type:
Location: 26017 - 27978 (-)
Gene ID: HRGMv2_4106_62_20
Type: TC
Location: 28011 - 28946 (-)
Gene ID: HRGMv2_4106_62_21
Type: TC
Location: 28959 - 29942 (-)
Gene ID: HRGMv2_4106_62_22
Type: CAZyme
Location: 30144 - 31502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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