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Cluster: HRGMv2_4106_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4106_56 HRGMv2_4106_56_12 10993 11991 + 9.B.157.1.2
pfam HRGMv2_4106_56 HRGMv2_4106_56_13 12285 13559 + Adenylsucc_synt
pfam HRGMv2_4106_56 HRGMv2_4106_56_14 13686 14807 + Radical_SAM | SPASM
CAZyme HRGMv2_4106_56 HRGMv2_4106_56_15 14874 16373 + GH77
STP HRGMv2_4106_56 HRGMv2_4106_56_16 16494 18005 + Fer4 | Fer4
TC HRGMv2_4106_56 HRGMv2_4106_56_17 18199 19263 + 2.A.120.1.7
TC HRGMv2_4106_56 HRGMv2_4106_56_18 19244 20059 - 3.A.1.17.3
TC HRGMv2_4106_56 HRGMv2_4106_56_19 20056 20817 - 3.A.1.16.1
Gene ID: HRGMv2_4106_56_12
Type: TC
Location: 10993 - 11991 (+)
Gene ID: HRGMv2_4106_56_13
Type: pfam
Location: 12285 - 13559 (+)
Gene ID: HRGMv2_4106_56_14
Type: pfam
Location: 13686 - 14807 (+)
Gene ID: HRGMv2_4106_56_15
Type: CAZyme
Location: 14874 - 16373 (+)
Gene ID: HRGMv2_4106_56_16
Type: STP
Location: 16494 - 18005 (+)
Gene ID: HRGMv2_4106_56_17
Type: TC
Location: 18199 - 19263 (+)
Gene ID: HRGMv2_4106_56_18
Type: TC
Location: 19244 - 20059 (-)
Gene ID: HRGMv2_4106_56_19
Type: TC
Location: 20056 - 20817 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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