Cluster: HRGMv2_4105_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_830 | 978232 | 979401 | - | GT4 |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_831 | 979824 | 981485 | - | HMGL-like | LeuA_dimer | IPMS_D2 |
| NULL(UNKNOWN) | HRGMv2_4105_1 | HRGMv2_4105_1_832 | 981930 | 986285 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_833 | 986683 | 988377 | - | 2.A.21.2.3 |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_834 | 988608 | 990002 | - | 2.A.66.1.33 |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_835 | 990187 | 991500 | - | GH13_20 |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_836 | 991697 | 993028 | + | 2.A.37.2.2 |
Gene ID: HRGMv2_4105_1_830
Type: CAZyme
Location: 978232 - 979401 (-)
Type: CAZyme
Location: 978232 - 979401 (-)
Gene ID: HRGMv2_4105_1_831
Type: pfam
Location: 979824 - 981485 (-)
Type: pfam
Location: 979824 - 981485 (-)
Gene ID: HRGMv2_4105_1_832
Type:
Location: 981930 - 986285 (-)
Type:
Location: 981930 - 986285 (-)
Gene ID: HRGMv2_4105_1_833
Type: TC
Location: 986683 - 988377 (-)
Type: TC
Location: 986683 - 988377 (-)
Gene ID: HRGMv2_4105_1_834
Type: TC
Location: 988608 - 990002 (-)
Type: TC
Location: 988608 - 990002 (-)
Gene ID: HRGMv2_4105_1_835
Type: CAZyme
Location: 990187 - 991500 (-)
Type: CAZyme
Location: 990187 - 991500 (-)
Gene ID: HRGMv2_4105_1_836
Type: TC
Location: 991697 - 993028 (+)
Type: TC
Location: 991697 - 993028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.