Cluster: HRGMv2_4105_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_583 | 688226 | 690031 | - | GH13_39 |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_584 | 690035 | 692470 | - | GT35 |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_585 | 692493 | 694142 | - | GT5 |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_586 | 694172 | 695278 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_587 | 695279 | 696484 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_588 | 696550 | 698427 | - | CBM48 | GH13_9 |
| peptidase | HRGMv2_4105_1 | HRGMv2_4105_1_589 | 699372 | 700430 | - | S09.UPW |
| peptidase | HRGMv2_4105_1 | HRGMv2_4105_1_590 | 700566 | 701483 | + | C40.UPW |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_591 | 701630 | 702970 | + | 9.A.40.2.4 |
Gene ID: HRGMv2_4105_1_583
Type: CAZyme
Location: 688226 - 690031 (-)
Type: CAZyme
Location: 688226 - 690031 (-)
Gene ID: HRGMv2_4105_1_584
Type: CAZyme
Location: 690035 - 692470 (-)
Type: CAZyme
Location: 690035 - 692470 (-)
Gene ID: HRGMv2_4105_1_585
Type: CAZyme
Location: 692493 - 694142 (-)
Type: CAZyme
Location: 692493 - 694142 (-)
Gene ID: HRGMv2_4105_1_586
Type: pfam
Location: 694172 - 695278 (-)
Type: pfam
Location: 694172 - 695278 (-)
Gene ID: HRGMv2_4105_1_587
Type: pfam
Location: 695279 - 696484 (-)
Type: pfam
Location: 695279 - 696484 (-)
Gene ID: HRGMv2_4105_1_588
Type: CAZyme
Location: 696550 - 698427 (-)
Type: CAZyme
Location: 696550 - 698427 (-)
Gene ID: HRGMv2_4105_1_589
Type: peptidase
Location: 699372 - 700430 (-)
Type: peptidase
Location: 699372 - 700430 (-)
Gene ID: HRGMv2_4105_1_590
Type: peptidase
Location: 700566 - 701483 (+)
Type: peptidase
Location: 700566 - 701483 (+)
Gene ID: HRGMv2_4105_1_591
Type: TC
Location: 701630 - 702970 (+)
Type: TC
Location: 701630 - 702970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.