Cluster: HRGMv2_4105_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_475 | 546530 | 548131 | + | GH20 |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_476 | 548150 | 548608 | + | LMWPc |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_477 | 548857 | 549801 | + | SBF | Mem_trans |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_478 | 550007 | 551707 | - | 1.A.26.1.2 |
Gene ID: HRGMv2_4105_1_475
Type: CAZyme
Location: 546530 - 548131 (+)
Type: CAZyme
Location: 546530 - 548131 (+)
Gene ID: HRGMv2_4105_1_476
Type: pfam
Location: 548150 - 548608 (+)
Type: pfam
Location: 548150 - 548608 (+)
Gene ID: HRGMv2_4105_1_477
Type: pfam
Location: 548857 - 549801 (+)
Type: pfam
Location: 548857 - 549801 (+)
Gene ID: HRGMv2_4105_1_478
Type: TC
Location: 550007 - 551707 (-)
Type: TC
Location: 550007 - 551707 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.