Cluster: HRGMv2_4105_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_260 | 324766 | 326013 | + | GH175 |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_261 | 326010 | 328877 | + | GH106 |
| STP | HRGMv2_4105_1 | HRGMv2_4105_1_262 | 328874 | 330265 | + | SBP_bac_1 |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_263 | 330285 | 331283 | + | 3.A.1.1.11 |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_264 | 331285 | 332151 | + | 3.A.1.1.39 |
| NULL(UNKNOWN) | HRGMv2_4105_1 | HRGMv2_4105_1_265 | 332176 | 334398 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4105_1 | HRGMv2_4105_1_266 | 334395 | 336170 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_267 | 336215 | 338311 | + | GH36 |
| NULL(UNKNOWN) | HRGMv2_4105_1 | HRGMv2_4105_1_268 | 338352 | 339566 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | HRGMv2_4105_1 | HRGMv2_4105_1_269 | 339581 | 342961 | + | S1_19 |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_270 | 343527 | 344606 | - | GT2 |
Gene ID: HRGMv2_4105_1_260
Type: CAZyme
Location: 324766 - 326013 (+)
Type: CAZyme
Location: 324766 - 326013 (+)
Gene ID: HRGMv2_4105_1_261
Type: CAZyme
Location: 326010 - 328877 (+)
Type: CAZyme
Location: 326010 - 328877 (+)
Gene ID: HRGMv2_4105_1_262
Type: STP
Location: 328874 - 330265 (+)
Type: STP
Location: 328874 - 330265 (+)
Gene ID: HRGMv2_4105_1_263
Type: TC
Location: 330285 - 331283 (+)
Type: TC
Location: 330285 - 331283 (+)
Gene ID: HRGMv2_4105_1_264
Type: TC
Location: 331285 - 332151 (+)
Type: TC
Location: 331285 - 332151 (+)
Gene ID: HRGMv2_4105_1_265
Type:
Location: 332176 - 334398 (+)
Type:
Location: 332176 - 334398 (+)
Gene ID: HRGMv2_4105_1_266
Type:
Location: 334395 - 336170 (+)
Type:
Location: 334395 - 336170 (+)
Gene ID: HRGMv2_4105_1_267
Type: CAZyme
Location: 336215 - 338311 (+)
Type: CAZyme
Location: 336215 - 338311 (+)
Gene ID: HRGMv2_4105_1_268
Type:
Location: 338352 - 339566 (+)
Type:
Location: 338352 - 339566 (+)
Gene ID: HRGMv2_4105_1_269
Type: sulfatase
Location: 339581 - 342961 (+)
Type: sulfatase
Location: 339581 - 342961 (+)
Gene ID: HRGMv2_4105_1_270
Type: CAZyme
Location: 343527 - 344606 (-)
Type: CAZyme
Location: 343527 - 344606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.