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Cluster: HRGMv2_4105_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4105_4 HRGMv2_4105_4_55 65292 66668 + CE2
NULL(UNKNOWN) HRGMv2_4105_4 HRGMv2_4105_4_56 66755 69700 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4105_4 HRGMv2_4105_4_57 69813 71639 + Flg_new | Flg_new
CAZyme HRGMv2_4105_4 HRGMv2_4105_4_58 71653 73659 + GH97
STP HRGMv2_4105_4 HRGMv2_4105_4_59 73677 75101 + SBP_bac_1
pfam HRGMv2_4105_4 HRGMv2_4105_4_60 75109 76137 + BPD_transp_1
TC HRGMv2_4105_4 HRGMv2_4105_4_61 76118 77032 + 3.A.1.1.36
TC HRGMv2_4105_4 HRGMv2_4105_4_62 77032 78780 + 3.A.1.1.26
CAZyme HRGMv2_4105_4 HRGMv2_4105_4_63 78791 80458 + GH123
Gene ID: HRGMv2_4105_4_55
Type: CAZyme
Location: 65292 - 66668 (+)
Gene ID: HRGMv2_4105_4_56
Type:
Location: 66755 - 69700 (+)
Gene ID: HRGMv2_4105_4_57
Type: pfam
Location: 69813 - 71639 (+)
Gene ID: HRGMv2_4105_4_58
Type: CAZyme
Location: 71653 - 73659 (+)
Gene ID: HRGMv2_4105_4_59
Type: STP
Location: 73677 - 75101 (+)
Gene ID: HRGMv2_4105_4_60
Type: pfam
Location: 75109 - 76137 (+)
Gene ID: HRGMv2_4105_4_61
Type: TC
Location: 76118 - 77032 (+)
Gene ID: HRGMv2_4105_4_62
Type: TC
Location: 77032 - 78780 (+)
Gene ID: HRGMv2_4105_4_63
Type: CAZyme
Location: 78791 - 80458 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Borkfalkiaceae
→
Genus
Borkfalkia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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