Cluster: HRGMv2_4105_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_4 | HRGMv2_4105_4_42 | 51250 | 52182 | + | 3.A.1.34.1 |
| TC | HRGMv2_4105_4 | HRGMv2_4105_4_43 | 52175 | 52948 | + | 3.A.1.34.1 |
| TC | HRGMv2_4105_4 | HRGMv2_4105_4_44 | 53058 | 54155 | + | 2.A.19.5.2 |
| TC | HRGMv2_4105_4 | HRGMv2_4105_4_45 | 54431 | 55009 | + | 2.A.115.2.14 |
| NULL(UNKNOWN) | HRGMv2_4105_4 | HRGMv2_4105_4_46 | 55020 | 55256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4105_4 | HRGMv2_4105_4_47 | 55198 | 56259 | + | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| CAZyme | HRGMv2_4105_4 | HRGMv2_4105_4_48 | 56278 | 58740 | + | GH3 |
Gene ID: HRGMv2_4105_4_42
Type: TC
Location: 51250 - 52182 (+)
Type: TC
Location: 51250 - 52182 (+)
Gene ID: HRGMv2_4105_4_43
Type: TC
Location: 52175 - 52948 (+)
Type: TC
Location: 52175 - 52948 (+)
Gene ID: HRGMv2_4105_4_44
Type: TC
Location: 53058 - 54155 (+)
Type: TC
Location: 53058 - 54155 (+)
Gene ID: HRGMv2_4105_4_45
Type: TC
Location: 54431 - 55009 (+)
Type: TC
Location: 54431 - 55009 (+)
Gene ID: HRGMv2_4105_4_46
Type:
Location: 55020 - 55256 (+)
Type:
Location: 55020 - 55256 (+)
Gene ID: HRGMv2_4105_4_47
Type: pfam
Location: 55198 - 56259 (+)
Type: pfam
Location: 55198 - 56259 (+)
Gene ID: HRGMv2_4105_4_48
Type: CAZyme
Location: 56278 - 58740 (+)
Type: CAZyme
Location: 56278 - 58740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.