Cluster: HRGMv2_4105_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4105
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_3 | HRGMv2_4105_3_278 | 302635 | 303717 | + | GH177 |
| CAZyme | HRGMv2_4105_3 | HRGMv2_4105_3_279 | 303719 | 304831 | + | GT4 |
| CAZyme | HRGMv2_4105_3 | HRGMv2_4105_3_280 | 304828 | 305910 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_4105_3 | HRGMv2_4105_3_281 | 305897 | 307342 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4105_3 | HRGMv2_4105_3_282 | 307357 | 308889 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_4105_3_278
Type: CAZyme
Location: 302635 - 303717 (+)
Type: CAZyme
Location: 302635 - 303717 (+)
Gene ID: HRGMv2_4105_3_279
Type: CAZyme
Location: 303719 - 304831 (+)
Type: CAZyme
Location: 303719 - 304831 (+)
Gene ID: HRGMv2_4105_3_280
Type: CAZyme
Location: 304828 - 305910 (+)
Type: CAZyme
Location: 304828 - 305910 (+)
Gene ID: HRGMv2_4105_3_281
Type:
Location: 305897 - 307342 (+)
Type:
Location: 305897 - 307342 (+)
Gene ID: HRGMv2_4105_3_282
Type: TC
Location: 307357 - 308889 (+)
Type: TC
Location: 307357 - 308889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.