Cluster: HRGMv2_4105_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- CGC Family ID: CGCFAM_00029
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_3 | HRGMv2_4105_3_270 | 292891 | 294717 | + | 9.B.18.2.1 |
| NULL(UNKNOWN) | HRGMv2_4105_3 | HRGMv2_4105_3_271 | 294762 | 296135 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4105_3 | HRGMv2_4105_3_272 | 296334 | 297548 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | HRGMv2_4105_3 | HRGMv2_4105_3_273 | 297535 | 298317 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4105_3 | HRGMv2_4105_3_274 | 298292 | 299551 | + | GT4 |
Gene ID: HRGMv2_4105_3_270
Type: TC
Location: 292891 - 294717 (+)
Type: TC
Location: 292891 - 294717 (+)
Gene ID: HRGMv2_4105_3_271
Type:
Location: 294762 - 296135 (+)
Type:
Location: 294762 - 296135 (+)
Gene ID: HRGMv2_4105_3_272
Type: pfam
Location: 296334 - 297548 (+)
Type: pfam
Location: 296334 - 297548 (+)
Gene ID: HRGMv2_4105_3_273
Type: TC
Location: 297535 - 298317 (+)
Type: TC
Location: 297535 - 298317 (+)
Gene ID: HRGMv2_4105_3_274
Type: CAZyme
Location: 298292 - 299551 (+)
Type: CAZyme
Location: 298292 - 299551 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.