Cluster: HRGMv2_4105_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_204 | 256894 | 257802 | + | 3.A.1.1.11 |
| TC | HRGMv2_4105_1 | HRGMv2_4105_1_205 | 257792 | 258703 | + | 3.A.1.1.27 |
| pfam | HRGMv2_4105_1 | HRGMv2_4105_1_206 | 258722 | 261664 | + | Big_3 | Big_3 | Big_3 |
| NULL(UNKNOWN) | HRGMv2_4105_1 | HRGMv2_4105_1_207 | 261664 | 263544 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4105_1 | HRGMv2_4105_1_208 | 263599 | 264846 | + | GH43_2 |
Gene ID: HRGMv2_4105_1_204
Type: TC
Location: 256894 - 257802 (+)
Type: TC
Location: 256894 - 257802 (+)
Gene ID: HRGMv2_4105_1_205
Type: TC
Location: 257792 - 258703 (+)
Type: TC
Location: 257792 - 258703 (+)
Gene ID: HRGMv2_4105_1_206
Type: pfam
Location: 258722 - 261664 (+)
Type: pfam
Location: 258722 - 261664 (+)
Gene ID: HRGMv2_4105_1_207
Type:
Location: 261664 - 263544 (+)
Type:
Location: 261664 - 263544 (+)
Gene ID: HRGMv2_4105_1_208
Type: CAZyme
Location: 263599 - 264846 (+)
Type: CAZyme
Location: 263599 - 264846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.