Cluster: HRGMv2_4105_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- CGC Family ID: CGCFAM_00350
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_493 | 567422 | 568327 | + | 3.A.1.1.11 |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_494 | 568317 | 569183 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_4105_2 | HRGMv2_4105_2_495 | 569215 | 571215 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4105_2 | HRGMv2_4105_2_496 | 571282 | 574803 | + | Big_2 | Big_2 |
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_497 | 574876 | 577395 | + | GH78 |
Gene ID: HRGMv2_4105_2_493
Type: TC
Location: 567422 - 568327 (+)
Type: TC
Location: 567422 - 568327 (+)
Gene ID: HRGMv2_4105_2_494
Type: TC
Location: 568317 - 569183 (+)
Type: TC
Location: 568317 - 569183 (+)
Gene ID: HRGMv2_4105_2_495
Type:
Location: 569215 - 571215 (+)
Type:
Location: 569215 - 571215 (+)
Gene ID: HRGMv2_4105_2_496
Type: pfam
Location: 571282 - 574803 (+)
Type: pfam
Location: 571282 - 574803 (+)
Gene ID: HRGMv2_4105_2_497
Type: CAZyme
Location: 574876 - 577395 (+)
Type: CAZyme
Location: 574876 - 577395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.