Cluster: HRGMv2_4105_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_402 | 447221 | 449083 | + | 3.A.16.1.2 |
| pfam | HRGMv2_4105_2 | HRGMv2_4105_2_403 | 449098 | 449631 | + | DUF308 | DUF308 | DUF308 |
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_404 | 450632 | 452953 | + | GH65 |
| pfam | HRGMv2_4105_2 | HRGMv2_4105_2_405 | 452950 | 453591 | + | Hydrolase | Hydrolase_like | HAD_2 |
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_406 | 453603 | 455690 | + | GH78 |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_407 | 455665 | 457179 | + | 3.A.1.1.10 |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_408 | 457191 | 458129 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4105_2_402
Type: TC
Location: 447221 - 449083 (+)
Type: TC
Location: 447221 - 449083 (+)
Gene ID: HRGMv2_4105_2_403
Type: pfam
Location: 449098 - 449631 (+)
Type: pfam
Location: 449098 - 449631 (+)
Gene ID: HRGMv2_4105_2_404
Type: CAZyme
Location: 450632 - 452953 (+)
Type: CAZyme
Location: 450632 - 452953 (+)
Gene ID: HRGMv2_4105_2_405
Type: pfam
Location: 452950 - 453591 (+)
Type: pfam
Location: 452950 - 453591 (+)
Gene ID: HRGMv2_4105_2_406
Type: CAZyme
Location: 453603 - 455690 (+)
Type: CAZyme
Location: 453603 - 455690 (+)
Gene ID: HRGMv2_4105_2_407
Type: TC
Location: 455665 - 457179 (+)
Type: TC
Location: 455665 - 457179 (+)
Gene ID: HRGMv2_4105_2_408
Type: TC
Location: 457191 - 458129 (+)
Type: TC
Location: 457191 - 458129 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.