Cluster: HRGMv2_4105_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_150 | 180573 | 181535 | + | 3.A.1.1.11 |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_151 | 181540 | 182430 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_4105_2 | HRGMv2_4105_2_152 | 182440 | 184350 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4105_2 | HRGMv2_4105_2_153 | 184380 | 188096 | + | Big_2 | Big_2 | Big_3 |
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_154 | 188176 | 190725 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4105_2_150
Type: TC
Location: 180573 - 181535 (+)
Type: TC
Location: 180573 - 181535 (+)
Gene ID: HRGMv2_4105_2_151
Type: TC
Location: 181540 - 182430 (+)
Type: TC
Location: 181540 - 182430 (+)
Gene ID: HRGMv2_4105_2_152
Type:
Location: 182440 - 184350 (+)
Type:
Location: 182440 - 184350 (+)
Gene ID: HRGMv2_4105_2_153
Type: pfam
Location: 184380 - 188096 (+)
Type: pfam
Location: 184380 - 188096 (+)
Gene ID: HRGMv2_4105_2_154
Type: CAZyme
Location: 188176 - 190725 (+)
Type: CAZyme
Location: 188176 - 190725 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.