Cluster: HRGMv2_4105_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_2 | 3255 | 4688 | - | GH43_4 |
| CAZyme | HRGMv2_4105_2 | HRGMv2_4105_2_3 | 4896 | 6836 | - | GH43_4 |
| NULL(UNKNOWN) | HRGMv2_4105_2 | HRGMv2_4105_2_4 | 6944 | 8962 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_5 | 9110 | 10099 | - | 3.A.1.1.48 |
| TC | HRGMv2_4105_2 | HRGMv2_4105_2_6 | 10096 | 11151 | - | 3.A.1.1.32 |
Gene ID: HRGMv2_4105_2_2
Type: CAZyme
Location: 3255 - 4688 (-)
Type: CAZyme
Location: 3255 - 4688 (-)
Gene ID: HRGMv2_4105_2_3
Type: CAZyme
Location: 4896 - 6836 (-)
Type: CAZyme
Location: 4896 - 6836 (-)
Gene ID: HRGMv2_4105_2_4
Type:
Location: 6944 - 8962 (-)
Type:
Location: 6944 - 8962 (-)
Gene ID: HRGMv2_4105_2_5
Type: TC
Location: 9110 - 10099 (-)
Type: TC
Location: 9110 - 10099 (-)
Gene ID: HRGMv2_4105_2_6
Type: TC
Location: 10096 - 11151 (-)
Type: TC
Location: 10096 - 11151 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.