dbCAN Logo

Cluster: HRGMv2_4100_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4100_53 HRGMv2_4100_53_8 6723 8246 + GH28
pfam HRGMv2_4100_53 HRGMv2_4100_53_9 8259 9428 + Lactamase_B | Flavodoxin_5 | ODP
TC HRGMv2_4100_53 HRGMv2_4100_53_10 9421 10056 + 1.A.22.1.3
TC HRGMv2_4100_53 HRGMv2_4100_53_11 10312 12021 - 3.A.1.11.7
TC HRGMv2_4100_53 HRGMv2_4100_53_12 12008 12820 - 3.A.1.11.8
TC HRGMv2_4100_53 HRGMv2_4100_53_13 12817 13614 - 3.A.1.11.8
TC HRGMv2_4100_53 HRGMv2_4100_53_14 13616 15130 - 3.A.1.11.8
Gene ID: HRGMv2_4100_53_8
Type: CAZyme
Location: 6723 - 8246 (+)
Gene ID: HRGMv2_4100_53_9
Type: pfam
Location: 8259 - 9428 (+)
Gene ID: HRGMv2_4100_53_10
Type: TC
Location: 9421 - 10056 (+)
Gene ID: HRGMv2_4100_53_11
Type: TC
Location: 10312 - 12021 (-)
Gene ID: HRGMv2_4100_53_12
Type: TC
Location: 12008 - 12820 (-)
Gene ID: HRGMv2_4100_53_13
Type: TC
Location: 12817 - 13614 (-)
Gene ID: HRGMv2_4100_53_14
Type: TC
Location: 13616 - 15130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List