Cluster: HRGMv2_4100_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4100
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4100_24 | HRGMv2_4100_24_45 | 43586 | 44653 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | HRGMv2_4100_24 | HRGMv2_4100_24_46 | 44666 | 45343 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4100_24 | HRGMv2_4100_24_47 | 45413 | 46159 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4100_24 | HRGMv2_4100_24_48 | 46152 | 47690 | + | GH28 |
| CAZyme | HRGMv2_4100_24 | HRGMv2_4100_24_49 | 47706 | 48365 | + | GH105 |
Gene ID: HRGMv2_4100_24_45
Type: TC
Location: 43586 - 44653 (+)
Type: TC
Location: 43586 - 44653 (+)
Gene ID: HRGMv2_4100_24_46
Type:
Location: 44666 - 45343 (+)
Type:
Location: 44666 - 45343 (+)
Gene ID: HRGMv2_4100_24_47
Type:
Location: 45413 - 46159 (+)
Type:
Location: 45413 - 46159 (+)
Gene ID: HRGMv2_4100_24_48
Type: CAZyme
Location: 46152 - 47690 (+)
Type: CAZyme
Location: 46152 - 47690 (+)
Gene ID: HRGMv2_4100_24_49
Type: CAZyme
Location: 47706 - 48365 (+)
Type: CAZyme
Location: 47706 - 48365 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Coproplasma
Species
Coproplasma sp949282385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.